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start [2018/07/24 10:57] beausoleilmo |
start [2018/12/31 10:47] alexcarter |
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| - | === Système d'information géographique | Geographic information system === | + | === Analyses spatiales | Spatial analysis === |
| <WRAP group> | <WRAP group> | ||
| <WRAP half column 50%> | <WRAP half column 50%> | ||
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| <WRAP half column 50%> | <WRAP half column 50%> | ||
| * [[bdlibre|Introduction à la gestion des bases de données avec des logiciels libres]] | * [[bdlibre|Introduction à la gestion des bases de données avec des logiciels libres]] | ||
| - | * [[comm_sci|Comment donner une bonne présentation scientifique]] | + | |
| - | * [[viz|Atelier de communication visuelle]] | + | |
| </WRAP> | </WRAP> | ||
| <WRAP half column> | <WRAP half column> | ||
| * [[opendb|Introduction to database management with open source tools]] | * [[opendb|Introduction to database management with open source tools]] | ||
| - | * [[sci_comm|How to give a great scientific talk]] | ||
| - | * [[viz|Visual communication workshop]] | ||
| </WRAP> | </WRAP> | ||
| <WRAP clear></WRAP> | <WRAP clear></WRAP> | ||
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| <WRAP group> | <WRAP group> | ||
| <WRAP half column 50%> | <WRAP half column 50%> | ||
| + | * [[comm_sci|Comment donner une bonne présentation scientifique]] | ||
| + | * [[viz|Atelier de communication visuelle]] | ||
| * [[atelier_comm | Atelier de communication scientifique écrite]] | * [[atelier_comm | Atelier de communication scientifique écrite]] | ||
| * [[graphiques|Intro au design graphique et manipulation d'images (logiciels libres)]] | * [[graphiques|Intro au design graphique et manipulation d'images (logiciels libres)]] | ||
| </WRAP> | </WRAP> | ||
| <WRAP half column> | <WRAP half column> | ||
| + | * [[sci_comm|How to give a great scientific talk]] | ||
| + | * [[viz|Visual communication workshop]] | ||
| * [[atelier_comm | (FR only) Atelier de communication scientifique écrite]] | * [[atelier_comm | (FR only) Atelier de communication scientifique écrite]] | ||
| * [[graphics|Intro to graphic design and image manipulation (open source tools)]] | * [[graphics|Intro to graphic design and image manipulation (open source tools)]] | ||
| Line 86: | Line 87: | ||
| * [[buildingaphylogeny|Basic steps for building a phylogenetic tree]], including [[phylogeny_with_beast|Dating node in a tree with BEAST2.0]] | * [[buildingaphylogeny|Basic steps for building a phylogenetic tree]], including [[phylogeny_with_beast|Dating node in a tree with BEAST2.0]] | ||
| * [[rqda|Qualitative data analysis using RQDA]] | * [[rqda|Qualitative data analysis using RQDA]] | ||
| + | * [[biome|BIOinformatics for MEtabarcoding]] | ||
| ===== Seminars and Journal Club ===== | ===== Seminars and Journal Club ===== | ||
| + | * [[microecoconf|Série de Conférences en Écologie Microbienne 2018-2019]] | ||
| * [[Midi Numérique | Midi numérique - UdM - Rencontres mensuelles organisée à l'UdM pour discuter de questions écologiques / statistiques / numériques - 2016]]\\ | * [[Midi Numérique | Midi numérique - UdM - Rencontres mensuelles organisée à l'UdM pour discuter de questions écologiques / statistiques / numériques - 2016]]\\ | ||
| * [[Journal Club - Ecologie/Evolution/Genetique | Journal Club - Ecologie/Evolution/Génétique - Rencontres hebdomadaires pour discuter d'un article scientifique - 2016]]\\ | * [[Journal Club - Ecologie/Evolution/Genetique | Journal Club - Ecologie/Evolution/Génétique - Rencontres hebdomadaires pour discuter d'un article scientifique - 2016]]\\ | ||
| Line 102: | Line 105: | ||
| === General Resources in Biology === | === General Resources in Biology === | ||
| * [[BiodiversityScience|Bibliographic resources for biodiversity science]]\\ | * [[BiodiversityScience|Bibliographic resources for biodiversity science]]\\ | ||
| + | * [[https://entomology.ifas.ufl.edu/frank/kiss/|"Keep it short & straightforward": writing help]] | ||
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| - | === Molecular Biology and DNA sequences analyses === | + | === Molecular Biology, DNA sequences analyses, and metabarcoding === |
| ==In the lab== | ==In the lab== | ||
| *[[Setting up a molecular biology laboratory|Setting up a laboratory for molecular biology]] | *[[Setting up a molecular biology laboratory|Setting up a laboratory for molecular biology]] | ||
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| *[[Bioinformatic tools to detect microsatellites loci from genomic data|Detect microsatellites loci from genomic data]] | *[[Bioinformatic tools to detect microsatellites loci from genomic data|Detect microsatellites loci from genomic data]] | ||
| *[[Guide to amplicon sequencing experiment|Amplicon sequencing]] for microbial communities | *[[Guide to amplicon sequencing experiment|Amplicon sequencing]] for microbial communities | ||
| + | *[[https://github.com/CristescuLab/Tutorials|Bioinformatics tutorials (Bash, quality control, etc.)]] | ||
| + | *[[https://github.com/alexiscarter/BIOME| BIOME Workshop | Atelier BIOME]] [[https://docs.google.com/document/d/1GCTyLQ2EziG1UaZcCKPWW93TPJT8LT96-gDbGxeKCEY/edit?usp=sharing|(Workshop notes)]] | ||
| + | *[[http://www.computationalgenomics.ca | C3G]] and see the [[http://www.computationalgenomics.ca/cvmfs-modules/| Bioinformatics resources]] | ||
| + | *[[https://bitbucket.org/mugqic/genpipes/overview| Bioinformatics pipelines "GenPipes"]] | ||
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